Jun 16, 2015 · In brief, pbPUP is an SVM-based predictor, which was constructed using the pbCKSAAP sequence encoding scheme. An overview of the computational ...
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PUP-Fuse: Prediction of Protein Pupylation Sites by Integrating ...
www.ncbi.nlm.nih.gov › PMC7924619
Feb 20, 2021 · proposed a web server, called pbPUP, to predict the pupylation sites using the profile-based features [20]. The predictors of GPS-PUP, iPUP, and ...
As shown in Table 3, the pbPUP predictor achieved improved performance with approximately 5%, 4%，and 7% higher MCC values under high, medium, and low ...
Fig 1. Overview of the proposed pbPUP predictor. The full-length sequence of a pupylated protein is first used to generate the PSSM profile by running PSI-BLAST ...
Prokaryotic proteins are regulated by pupylation, a type of post-translational modification which contributes to cellular function in bacterial organisms.
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The prediction performance of pbPUP and other existing predictors evaluated on the independent test dataset.
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Jun 15, 2015 · In this paper, a novel predictor termed as pbPUP has been developed for accurate prediction of pupylation sites. In particular, a ...
